Fall 2022

● The Weekly Wednesday Wartik Genomics Lecture Series (WWWGLS) is held in 501 Wartik Lab (large commons area) on Wednesdays at 3 pm, unless noted otherwise.
● Coffee, tea, and snacks are usually served after the presentation.
● PSU faculty can nominate speakers via this form
● PSU affiliates can sign up to receive seminar announcements using L-WWWGLS@lists.psu.edu.

Date	Presenter(s)	Topic
August 31	David Koslicki Hosted by: Francesca Chiaromonte No Zoom URL	FracMinHash: quickly estimate genome/metagenome similarity, ANI, and AAI
September 7	Marzia A Cremona Hosted by: Francesca Chiaromonte No Zoom URL	Functional data analysis of high-resolution "Omics" data
September 14	Angelika Lahnsteiner University of Salzburg, Austria Hosted by: Kateryna Makova No Zoom URL	Permanganate S1 footprinting with direct adapter ligation opens new possibilities in detecting non-B DNA structures responsible for changes in DNA methylation in lung cancer.
September 21	Qiuhai Zeng; Qimin Zhang PSU Hosted by: Qunhua Li No Zoom URL	JOnTAD: Joint hierarchical TAD caller for high resolution, single cell and bulk cell Hi-C data; Accurate assembly of multi-end RNA-seq data with Scallop2
October 4 3:00PM Paterno Library room 102 (Foster Auditorium)	Kateryna Makova PSU Hosted by: Kateryna Makova Zoom URL	Detection and dynamics of mitochondrial mutations in mammalian populations and single cells with applications to aging and diseases
October 12	Matthias Weissensteiner PSU Hosted by: Kateryna Makova No Zoom URL	Non-B DNA: Distribution on the telomere-to-telomere human Y chromosome and effects on sequencing success
October 19	Anton Nekrutenko PSU Hosted by: Anton Nekrutenko No Zoom URL	The next decade of Galaxy [Slides]
October 26	No Zoom URL
November 2	Zachary A. Szpiech PSU Hosted by: Paul Medvedev Zoom URL	Haplotype-based Scans for Detecting Natural Selection
November 9	Daniel Savic St. Jude Children's Research Hospital Hosted by: Ross Hardison Zoom URL	Cis-regulatory disruptions impacting canonical Wnt signaling promote glucocorticoid resistance in childhood acute lymphoblastic leukemia
November 16	Jian Wang PSU College of Medicine Hosted by: Paul Medvedev Zoom URL	Machine learning is revolutionizing structural bioinformatics [Slides]
November 30	Francesca Chiaromonte PSU Hosted by: Ross Hardison Zoom URL	Reducing, selecting and leveraging structure in contemporary data – some reflections, looking ahead
December 7	Jennifer Wagner PSU Hosted by: George Perry Zoom URL	Hot Topics in Genetics/omics Law