| Date | Presenter(s) | Topic |
|---|---|---|
| January 8 |
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| January 15 |
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| January 22 |
Prajna Hebbar UC Santa Cruz Host: CMG (Kateryna Makova) Zoom URL |
Using high-quality gene annotations on complete primate genomes and human pangenomes to study gene evolution |
| January 29 |
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| February 5 |
Yuseob Kim Ewha Womans Univ, S. Korea Host: CCBB (Christian Huber) Zoom URL |
The storage effect, an explanation for genome-wide oscillatory polymorphism |
| February 12 Foster Auditorium (102 Paterno Library) |
Luis Barreiro Univ. Chicago Host: Marker Lecture in Biology |
Exploring evolutionary immunogenomics: Lessons from our ancestors and past pandemics |
| To be rescheduled |
Wilfried Guiblet Host: CMG (Kateryna Makova) |
TBA |
| February 26 |
Ke Chen PSU Host: CCBB (Mingfu Shao) Zoom URL |
Dealing with edits: from k-mer to subsequence and independent sampling to correlated embeddings |
| March 5 |
Max Haeussler Univ CA, Santa Cruz Host: BMB (Anton Nekrutenko) Zoom URL |
The UCSC Genome Browser Infrastructure |
| March 19 |
Justin Silverman PSU Host: CMG (Kateryna Makova) Zoom URL |
Advances in Modeling Microbiome and Gene Expression Data |
| March 26 |
Yogasudha Veturi PSU Host: CMG (Kateryna Makova) Zoom URL |
Data-driven approaches to understand patterns in complex human diseases |
| April 2 |
Adam Park ; Aaryan Sarnaik PSU Host: BG (Mingfu Shao) Zoom URL |
Prokrustean Graph: A substring index for rapid k-mer size analysis ; An exact and fast SAT formulation for the DCJ distance |
| April 9 |
Mahmudur Rahman Hera PSU Host: CCBB (David Koslicki) Zoom URL |
Accurate and scalable estimation of distance and similarity using k-mers and sketching |
| April 14 12:00 pm Foster Auditorium (102 Paterno Library) |
Edward Holmes Univ. of Sydney Host: Center for Infectious Disease Dynamics, Center for Medical Genomics, Center for Human Evolution & Diversity |
Redefining Virus Evolution and Emergence Using Metatranscriptomis |
| April 16 |
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| April 23 |
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| April 30 |
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| May 7 |
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| May 14 Zoom link available upon request |
Nathan Sheffield Univ of Virginia Host: CCBB (Paul Medvedev) |
Representation learning of the epigenome |