| Date | Presenter(s) | Topic |
|---|---|---|
| January 16 4:00 pm |
Lyle Long Pennsylvania State University Host: Steve Schaeffer Zoom URL |
On the Importance of Computational and Data Science |
| January 23 4:00 pm |
Tanya Renner Pennsylvania State University Host: Paul Medvedev, Center for Computational Biology and Bioinformatics Zoom URL |
Duplication, Divergence, and Convergence: What can we Learn from Studying Carnivorous Plant Genomes? |
| January 30 4:00 pm Note change of location to 110 Wartik Lab |
BMB Faculty Candidate Colin C. Conine University of Massachusetts Medical School Host: Ross Hardison |
Transmission of Non-genetic Information by Sperm Small RNAs |
| February 6 4:00 pm |
Naomi Yamada & Matthew Jensen Pennsylvania State University Zoom URL |
Naomi: Analysis of ChIP-exo Read Profiles Reveals Spatial Organizations of Protein Complexes/Matthew: An Interaction and Network-Based Model for Neuropsychiatric Features of Copy-Number Variants |
| February 13 4:00 pm |
Sarah Craig and Ana Kenney Pennsylvania State University Host: Center for Medical Genomics Zoom URL |
Using Early Life Growth Trajectories to Construct a Childhood Obesity Genetic Risk Score |
| February 20 4:00 pm |
Xiaojun Lance Lian Pennsylvania State University Host: Paul Medvedev, Center for Computational Biology and Bioinformatics Zoom URL |
RNA-Seq Analysis of Cardiac Differentiation of Human Pluripotent Stem Cells |
| February 27 4:00 pm |
Nate Person & Rahul Vegesna Pennsylvania State University Zoom URL |
NATE: Horizontal Gene Transfer in Parasitic Plants; RAHUL: Impact of Copy Number Variation on the Expression of Human Y Chromosome Ampliconic Genes |
| March 13 4:00 pm |
Ming Hu Cleveland Clinic Host: Dr. Qunhua Li, Center for Computational Biology and Bioinformatics Zoom URL |
MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments |
| March 20 4:00 pm |
Olga Dudchenko TBA Host: Dean Douglas Cavener Zoom URL |
Hi-C Genome Assembly at the DNA Zoo: Inexpensive, Accurate and Open-Source |
| March 27 4:00 pm |
Tanzeen Yusuff & Molly Rathbun Pennsylvania State University Zoom URL |
TANZEEN: High-throughput developmental analysis of CNV genes in Drosophila melanogaster; MOLLY: Exploring Patterns of Genetic Variation in Herpes Simplex Virus 1 Clinical Infections |
| April 3 4:00 pm |
Yifei Huang Pennsylvania State University Host: Center for Medical Genomics Zoom URL |
Unified prediction of highly constrained genes and deleterious variants in the human genome |
| April 10 4:00 pm |
Ilia Minkin Pennsylvania State University Zoom URL |
TScalable multiple whole-genome alignment and locally collinear block construction with SibeliaZ |
| April 17 4:00 pm |
Gregory Cooper HudsonAlpha Institute for Biotechnology Host: Santhosh Girirajan, Center for Computational Biology and Bioinformatics Zoom URL |
Genomic Diagnosis for Developmental Delays |
| April 24 4:00 pm |
Scott Eckert & Sage Wright Pennsylvania State University Zoom URL |
SCOTT: Assembling scraps: Deriving host genotype and dietary phenotypes from metagenomic datasets SAGE: An Integrated Whole-Genome Analysis of Structural Variation in Breast Cancer Cell Line T47D |
| May 1 4:00 pm |
David Toews Pennsylvania State University Zoom URL |
Using Genomics to Understand Ancient and Contemporary Hybridization Amongst Wood Warblers |
| May 8 4:00 pm |
Robin Dowell University of Colorado Host: Shaun Mahony, Center for Computational Biology and Bioinformatics Zoom URL |
Dissecting transcriptional regulation from nascent transcription |
| May 15 4:00 pm |
Hong Ma Pennsylvania State University Zoom URL |
Genomics Meet Genetics: Conservation and Divergence of Duplicated Genes Regulating Plant Development |
| May 22 4:00 pm |
Barbara Arbeithuber Pennsylvania State University Host: Center for Medical Genomics Zoom URL |
Rare mitochondrial DNA variants in mouse pedigrees - duplex sequencing of (single) oocytes and somatic tissues |
| May 29 4:00 pm |
Juan Cerda & Bipin Rimal Pennsylvania State University Zoom URL |
JUAN: Evolutionary Genomics of Parasitic Plants; BIPIN: Integration of Multi-omics Data to Gain Insight into Microbiome Toxicity Elicited by Xenobiotics |
| June 12 4:00 pm |
Stephane Boissinot NYU Abu Dhabi Host: Center for Medical Genomics Zoom URL |
Evolutionary Dynamics of Transposable Elements in Vertebrate Genomes |