| Date | Presenter(s) | Topic |
|---|---|---|
| August 23 |
Jessica Li UCLA Host: CCBB (contact: Qunhua Li) Zoom URL |
Enhancing statistical rigor in single-cell data analysis using synthetic negative controls |
| September 6 |
Yana Safonova PSU Host: CCBB (contact: Medvedev, Chiaromonte) Zoom URL |
Computational approaches to studying adaptive immunity |
| September 20 |
Jinguo Huang ; Jianyu Yang PSU Host: BGEN (contact: Koslicki) Zoom URL |
Interpreting SNP heritability in admixed populations ; SEM: sized-based expectation maximum for characterizing nucleosome positions and types |
| September 27 |
Cheryl Keller PSU Zoom URL |
Genomics Research Incubator |
| October 4 |
Justin Silverman PSU Host: IGS (contact: Chiaromonte) Zoom URL |
Viewing sequence count data analysis as a problem of partially identified models: limits on inference, and strategies for rigorous estimation |
| October 11 |
Monika Cechova UCSC Host: CMG (contact: Makova) Zoom URL |
Complete genomes of a multi-generational pedigree to expand studies of genetic and epigenetic inheritance |
| October 25 |
Jacopo Di Iorio PSU Host: IGS (contact: Chiaromonte) Zoom URL |
On the use and bias of the mean squared residue score in multivariate and functional biclustering |
| November 1 |
Anton Bankevich PSU Host: CCBB (contact: Medvedev, Chiaromonte) Zoom URL |
Modern challenges of genome assembly |
| November 8 |
Jian Ma Carnegie Mellon Host: CMG (contact: Makova) Zoom URL |
Integrative modeling of multiscale single-cell spatial epigenome |
| November 15 |
Linnéa Smeds Univ. of Uppsala Host: CMG (contact: Makova) Zoom URL |
Conservation genomics in inbred Scandinavian wolves |
| November 22 |
[Thanksgiving break] |
|
| November 29 |
Ioannis Mouratidis ; Xinru Zhang PSU Host: BGEN (contact: Koslicki) Zoom URL |
Quasi-primes: identifying the shortest species-specific sequences ; Pooling-based phylogenetic methods elucidate accelerated evolution of cis-regulatory elements |
| December 6 |
Hyebin Song PSU Host: IGS (contact: Chiaromonte) Zoom URL |
Uncertainty quantification for parameter estimates from Markov chain Monte Carlo methods |
| December 13 |
[no seminar] |